GWAS1560751_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1560751_H (body mass index QTL GWAS1560751 (human)) Homo sapiens

Symbol: GWAS1560751_H
Name: body mass index QTL GWAS1560751 (human)
RGD ID: 597464677
Trait: body mass index
Measurement Type: body mass index (BMI)   (CMO:0000105)    
LOD Score: Not Available
P Value: 2.0E-10
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381558,764,513 - 58,764,514RGD_MAPPER_PIPELINEGRCh38
GRCh371559,056,712 - 59,056,713RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1560751_HHumanbody mass index (BMI)  IAGPrs1426652405850206 GWAS_CATALOGPMID:30239722

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1560751_HHumanbody mass index  IAGPrs1426652405850206 GWAS_CATALOGPMID:30239722

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs1426652)
Human AssemblyChrPosition (strand)Source
GRCh381558,764,513 - 58,764,514RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
597464677GWAS1560751_Hbody mass index QTL GWAS1560751 (human)2e-10body mass indexbody mass index (BMI) (CMO:0000105)155876451358764514Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1560751_H GCST009004 Body mass index 806,834 European ancestry individuals A 0.1672 2E-10 9.699 rs1426652 0.0149 body mass index (EFO:0004340)
 PMID:30239722
Database
Acc Id
Source(s)
GWAS Catalog GCST009004 GWAS Catalog

Note Type Note Reference