GWAS1559424_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1559424_H (diastolic blood pressure QTL GWAS1559424 (human)) Homo sapiens

Symbol: GWAS1559424_H
Name: diastolic blood pressure QTL GWAS1559424 (human)
RGD ID: 597463350
Trait: diastolic blood pressure
Measurement Type: diastolic blood pressure   (CMO:0000005)    
LOD Score: Not Available
P Value: 1.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38311,625,649 - 11,625,650RGD_MAPPER_PIPELINEGRCh38
GRCh37311,667,123 - 11,667,124RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1559424_HHumandiastolic blood pressure  IAGPrs2616551405850206 GWAS_CATALOGPMID:39537608

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1559424_HHumandiastolic blood pressure  IAGPrs2616551405850206 GWAS_CATALOGPMID:39537608

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1323223VGLL4vestigial like family member 431155606711721815Human


Peak: (rs2616551)
Human AssemblyChrPosition (strand)Source
GRCh38311,625,649 - 11,625,650RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2316345GLUCO224_HGlucose level QTL 224 (human)1.270.008Glucose level3121543441Human
597463350GWAS1559424_Hdiastolic blood pressure QTL GWAS1559424 (human)1e-08diastolic blood pressurediastolic blood pressure (CMO:0000005)31162564911625650Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1559424_H GCST90449057 Diastolic blood pressure (MTAG) at least 757,601 European ancestry individuals (MTAG boosted by 455,258 Alzheimer's disease samples) G NR 1E-8 8 rs2616551 0.012346897 diastolic blood pressure (EFO:0006336)
 PMID:39537608
Database
Acc Id
Source(s)
GWAS Catalog GCST90449057 GWAS Catalog

Note Type Note Reference