QTL: GWAS1552791_H (hemoglobin A1 measurement QTL GWAS1552791 (human)) Homo sapiens
Symbol:
GWAS1552791_H
Name:
hemoglobin A1 measurement QTL GWAS1552791 (human)
RGD ID:
597456717
Trait:
hemoglobin A1 measurement
LOD Score:
Not Available
P Value:
4.0E-10
Variance:
Not Available
Position
Human Assembly Chr Position (strand) Source JBrowse GRCh38 15 38,580,914 - 38,580,915 RGD_MAPPER_PIPELINE GRCh38 GRCh37 15 38,873,115 - 38,873,116 RGD_MAPPER_PIPELINE GRCh37
Population Stats:
Not Available
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Peak: (rs34715063 )
Human Assembly Chr Position (strand) Source GRCh38 15 38,580,914 - 38,580,915 RGD_MAPPER_PIPELINE
2289410 BW327_H Body weight QTL 327 (human) 3.32 0.0001 Body fat amount 15 19980129 45980129 Human 1559411 SCL107_H Serum cholesterol level QTL 107 (human) 3.88 Lipid level triglyceride 15 26543552 52543552 Human 597486169 GWAS1582243_H type 2 diabetes mellitus QTL GWAS1582243 (human) 1e-11 type 2 diabetes mellitus 15 38580914 38580915 Human 597017331 GWAS1113405_H type 2 diabetes mellitus QTL GWAS1113405 (human) 4e-20 type 2 diabetes mellitus 15 38580914 38580915 Human 597606134 GWAS1662994_H HbA1c measurement QTL GWAS1662994 (human) 1e-14 HbA1c measurement blood hemoglobin A1c level (CMO:0002786) 15 38580914 38580915 Human 597588055 GWAS1644915_H diabetes mellitus QTL GWAS1644915 (human) 4e-11 pancreas integrity trait (VT:0010560) 15 38580914 38580915 Human 597588695 GWAS1645555_H glucose measurement QTL GWAS1645555 (human) 2e-14 glucose measurement blood glucose level (CMO:0000046) 15 38580914 38580915 Human 1559354 LDLPS4_H Low density lipoprotein particle size QTL 4 (human) 2.2 0.019 LDL particle size 15 34790230 60790230 Human 597594707 GWAS1651567_H glucose measurement QTL GWAS1651567 (human) 9e-22 glucose measurement blood glucose level (CMO:0000046) 15 38580914 38580915 Human 2289420 BW314_H Body weight QTL 314 (human) 2.72 0.0003 Body weight lean mass 15 19980129 45980129 Human 597389844 GWAS1485918_H type 2 diabetes mellitus QTL GWAS1485918 (human) 2e-19 type 2 diabetes mellitus 15 38580914 38580915 Human 1643273 BW330_H Body Weight QTL 330 (human) 1.05 0.014 Body weight body mass index 15 26866719 52866719 Human 597456717 GWAS1552791_H hemoglobin A1 measurement QTL GWAS1552791 (human) 4e-10 hemoglobin A1 measurement 15 38580914 38580915 Human 2289430 BMD7_H Bone mineral density QTL 7 (human) 3.32 0.0001 Bone mineral density 15 19980129 45980129 Human 2299958 PRSTS330_H Prostate tumor susceptibility QTL 330 (human) 1.02 0.0151 Prostate tumor susceptibility 15 34790230 60790230 Human 597594633 GWAS1651493_H glucose measurement QTL GWAS1651493 (human) 3e-13 glucose measurement blood hemoglobin A1c level (CMO:0002786) 15 38580914 38580915 Human 1643523 BW284_H Body Weight QTL 284 (human) 1.95 0.0013 Body weight 15 21792889 47792889 Human 597508582 GWAS1604656_H type 2 diabetes mellitus QTL GWAS1604656 (human) 5e-19 type 2 diabetes mellitus 15 38580914 38580915 Human 597381792 GWAS1477866_H type 2 diabetes mellitus QTL GWAS1477866 (human) 2e-13 type 2 diabetes mellitus 15 38580914 38580915 Human 597587970 GWAS1644830_H type 2 diabetes mellitus QTL GWAS1644830 (human) 3e-11 type 2 diabetes mellitus 15 38580914 38580915 Human
Data has come from the GWAS Catalog
The highlighted row represents the current QTL
GWAS1552791_H GCST90018958 Hemoglobin A1c levels
344,182 European ancestry individuals, 71,221 East Asian ancestry individuals
C
NR
4E-10
9.398
rs34715063 0.0215
hemoglobin A1 measurement (EFO:0007629)
PMID:34594039
GWAS1113405_H GCST90132183 Type 2 diabetes
251,740 European ancestry individuals, 139,705 East Asian ancestry individuals, 40,737 South Asian ancestry individuals, 27,417 Hispanic individuals, 30,167 African American individuals, 2,426 Zulu ancestry individuals
C
NR
4E-20
19.398
rs34715063 1.09
PMID:35551307
GWAS1644830_H GCST90475667 Type 2 diabetes (PheCode 250.2)
154,194 European ancestry cases, 278,454 European ancestry controls
T
0.872
3E-11
10.523
rs34715063 0.0365
PMID:39024449
GWAS1644915_H GCST90475658 Diabetes mellitus (PheCode 250)
154,958 European ancestry cases, 276,347 European ancestry controls
T
0.872
4E-11
10.398
rs34715063 0.03683
diabetes mellitus (EFO:0000400)
PMID:39024449
GWAS1645555_H GCST90479626 Glucose (fasting status unknown, mean, inv-norm transformed)
118,233 African American or Afro-Caribbean individuals, 57,284 Hispanic or Latin American individuals, 6,317 East Asian ancestry individuals, 419,946 European ancestry individuals
T
0.8924
2E-14
13.699
rs34715063 0.0378
glucose measurement (EFO:0004468)
PMID:39024449
GWAS1651493_H GCST90475329 Glucose (fasting status unknown, maximum, inv-norm transformed)
419,671 European ancestry individuals
T
0.8722
3E-13
12.523
rs34715063 0.02974
glucose measurement (EFO:0004468)
PMID:39024449
GWAS1651567_H GCST90475332 Glucose (fasting status unknown, mean, inv-norm transformed)
419,946 European ancestry individuals
T
0.8722
9E-22
21.046
rs34715063 0.03996
glucose measurement (EFO:0004468)
PMID:39024449
GWAS1662994_H GCST90475094 Hemoglobin A1c (HbA1c, mean, inv-norm transformed)
338,848 European ancestry individuals
T
0.8718
1E-14
14
rs34715063 0.03557
HbA1c measurement (EFO:0004541)
PMID:39024449
None Available
GCST90475091 Hemoglobin A1c (HbA1c, maximum, inv-norm transformed)
338,857 European ancestry individuals
T
0.8718
3E-13
12.523
rs34715063 0.03314
HbA1c measurement (EFO:0004541)
PMID:39024449
GWAS1477866_H GCST007077 Type 2 diabetes
approximately 459,000 European ancestry individuals
?
NR
2E-13
12.699
rs34715063 N/A
PMID:30595370
GWAS1485918_H GCST009379 Type 2 diabetes
74,124 European ancestry cases, 824,006 European ancestry controls
C
0.1235
2E-19
18.699
rs34715063 1.1
PMID:30297969
GWAS1582243_H GCST90018926 Type 2 diabetes
38,841 European ancestry cases, 451,248 European ancestry controls, 45,383 East Asian ancestry cases, 132,032 East Asian ancestry controls
C
NR
1E-11
11
rs34715063 0.0898
PMID:34594039
GWAS1604656_H GCST90132184 Type 2 diabetes
251,740 European ancestry individuals
C
0.122
5E-19
18.302
rs34715063 0.088
PMID:35551307
