GWAS1546032_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1546032_H (systolic blood pressure QTL GWAS1546032 (human)) Homo sapiens

Symbol: GWAS1546032_H
Name: systolic blood pressure QTL GWAS1546032 (human)
RGD ID: 597449958
Trait: systolic blood pressure
Measurement Type: systolic blood pressure   (CMO:0000004)    
LOD Score: Not Available
P Value: 1.0E-19
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh382207,538,026 - 207,538,027RGD_MAPPER_PIPELINEGRCh38
GRCh372208,402,750 - 208,402,751RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1546032_HHumansystolic blood pressure  IAGPrs4675682405850206 GWAS_CATALOGPMID:39537608

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1546032_HHumansystolic blood pressure  IAGPrs4675682405850206 GWAS_CATALOGPMID:39537608

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
730886CREB1cAMP responsive element binding protein 12207529962207605988Human


Peak: (rs4675682)
Human AssemblyChrPosition (strand)Source
GRCh382207,538,026 - 207,538,027RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2293458PRSTS291_HProstate tumor susceptibility QTL 291 (human)0.012Prostate tumor susceptibility2200715236226715236Human
597097636GWAS1193710_Hsex hormone-binding globulin measurement QTL GWAS1193710 (human)9e-16sex hormone-binding globulin measurement2207538026207538027Human
597098373GWAS1194447_Hsex hormone-binding globulin measurement QTL GWAS1194447 (human)3e-15sex hormone-binding globulin measurement2207538026207538027Human
1643053BW117_HBody Weight QTL 117 (human)2.40.00044Body weight2200715236226715236Human
597460587GWAS1556661_Hdiastolic blood pressure QTL GWAS1556661 (human)2e-15diastolic blood pressurediastolic blood pressure (CMO:0000005)2207538026207538027Human
597273744GWAS1369818_Hsystolic blood pressure QTL GWAS1369818 (human)1e-14systolic blood pressuresystolic blood pressure (CMO:0000004)2207538026207538027Human
597449958GWAS1546032_Hsystolic blood pressure QTL GWAS1546032 (human)1e-19systolic blood pressuresystolic blood pressure (CMO:0000004)2207538026207538027Human
1643254BW125_HBody Weight QTL 125 (human)1.450.005Body weightbody mass index2200715236226715236Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1546032_H GCST90449056 Systolic blood pressure (MTAG) at least 757,601 European ancestry individuals (MTAG boosted by 455,258 Alzheimer's disease samples) C NR 1E-19 19 rs4675682 0.01550684 systolic blood pressure (EFO:0006335)
 PMID:39537608
GWAS1193710_H GCST90012108 Sex hormone-binding globulin levels adjusted for BMI 180,094 European ancestry men T 0.539819 9E-16 15.046 rs4675682 0.00859051 sex hormone-binding globulin measurement (EFO:0004696)
 PMID:32042192
GWAS1194447_H GCST90012109 Sex hormone-binding globulin levels 180,726 European ancestry men T 0.539819 3E-15 14.523 rs4675682 0.00894896 sex hormone-binding globulin measurement (EFO:0004696)
 PMID:32042192
GWAS1369818_H GCST90132903 Systolic blood pressure 526,001 European ancestry individuals T NR 1E-14 14 rs4675682 0.2789 systolic blood pressure (EFO:0006335)
 PMID:35762941
GWAS1556661_H GCST90449057 Diastolic blood pressure (MTAG) at least 757,601 European ancestry individuals (MTAG boosted by 455,258 Alzheimer's disease samples) C NR 2E-15 14.699 rs4675682 0.013491236 diastolic blood pressure (EFO:0006336)
 PMID:39537608
Database
Acc Id
Source(s)
GWAS Catalog GCST90449056 GWAS Catalog

Note Type Note Reference