GWAS1526681_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1526681_H (protein measurement QTL GWAS1526681 (human)) Homo sapiens

Symbol: GWAS1526681_H
Name: protein measurement QTL GWAS1526681 (human)
RGD ID: 597430607
Trait: protein measurement
LOD Score: Not Available
P Value: 3.0E-73
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3819,235,385 - 9,235,386RGD_MAPPER_PIPELINEGRCh38
GRCh3719,295,444 - 9,295,445RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1526681_HHumanprotein measurement  IAGPrs9435144405850206 GWAS_CATALOGPMID:39528825

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1315252H6PDhexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase192347749271337Human


Peak: (rs9435144)
Human AssemblyChrPosition (strand)Source
GRCh3819,235,385 - 9,235,386RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
406981891GWAS630867_Hblood protein measurement QTL GWAS630867 (human)9e-96blood protein amount (VT:0005416)blood protein measurement (CMO:0000028)192353859235386Human
597430607GWAS1526681_Hprotein measurement QTL GWAS1526681 (human)3e-73protein measurement192353859235386Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1526681_H GCST90426948 GDH/6PGL endoplasmic bifunctional protein levels 3,506 European ancestry individuals C 0.393764 3E-73 72.523 rs9435144 0.4084 protein measurement (EFO:0004747)
 PMID:39528825
GWAS630867_H GCST006585 Blood protein levels 3,200 European ancestry individuals C 0.425 9E-96 95.046 rs9435144 0.5110725 blood protein measurement (EFO:0007937)
 PMID:30072576
Database
Acc Id
Source(s)
GWAS Catalog GCST90426948 GWAS Catalog

Note Type Note Reference