GWAS1497770_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1497770_H (factor VII measurement QTL GWAS1497770 (human)) Homo sapiens

Symbol: GWAS1497770_H
Name: factor VII measurement QTL GWAS1497770 (human)
RGD ID: 597401696
Trait: factor VII measurement
LOD Score: Not Available
P Value: 2.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381555,746,691 - 55,746,692RGD_MAPPER_PIPELINEGRCh38
GRCh371556,038,889 - 56,038,890RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1497770_HHumanfactor VII measurement  IAGPrs117976868405850206 GWAS_CATALOGPMID:30642921

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs117976868)
Human AssemblyChrPosition (strand)Source
GRCh381555,746,691 - 55,746,692RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
597401696GWAS1497770_Hfactor VII measurement QTL GWAS1497770 (human)0.000002factor VII measurement155574669155746692Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1497770_H GCST007401 Factor VII activity 20,014 European ancestry individuals, 3,420 African American individuals A 0.99 0.000002 5.699 rs117976868 0.051 factor VII measurement (EFO:0004619)
 PMID:30642921
Database
Acc Id
Source(s)
GWAS Catalog GCST007401 GWAS Catalog

Note Type Note Reference