GWAS1486152_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1486152_H (risk-taking behaviour QTL GWAS1486152 (human)) Homo sapiens

Symbol: GWAS1486152_H
Name: risk-taking behaviour QTL GWAS1486152 (human)
RGD ID: 597390078
Trait: risk-taking behaviour
LOD Score: Not Available
P Value: 6.0E-10
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381546,511,642 - 46,511,643RGD_MAPPER_PIPELINEGRCh38
GRCh371546,803,840 - 46,803,841RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1486152_HHumanrisk-taking behaviour  IAGPrs11070529405850206 GWAS_CATALOGPMID:30643258

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs11070529)
Human AssemblyChrPosition (strand)Source
GRCh381546,511,642 - 46,511,643RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1643273BW330_HBody Weight QTL 330 (human)1.050.014Body weightbody mass index152686671952866719Human
1559411SCL107_HSerum cholesterol level QTL 107 (human)3.88Lipid leveltriglyceride152654355252543552Human
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
597390078GWAS1486152_Hrisk-taking behaviour QTL GWAS1486152 (human)6e-10risk-taking behaviour154651164246511643Human
1643523BW284_HBody Weight QTL 284 (human)1.950.0013Body weight152179288947792889Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1486152_H GCST007325 General risk tolerance (MTAG) 975,353 European ancestry individuals T 0.47 6E-10 9.222 rs11070529 0.0073 risk-taking behaviour (EFO:0008579)
 PMID:30643258
Database
Acc Id
Source(s)
GWAS Catalog GCST007325 GWAS Catalog

Note Type Note Reference