GWAS1483531_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1483531_H (obsessive-compulsive disorder, autism spectrum disorder QTL GWAS1483531 (human)) Homo sapiens

Symbol: GWAS1483531_H
Name: obsessive-compulsive disorder, autism spectrum disorder QTL GWAS1483531 (human)
RGD ID: 597387457
Trait: obsessive-compulsive disorder, autism spectrum disorder
LOD Score: Not Available
P Value: 7.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381560,080,022 - 60,080,023RGD_MAPPER_PIPELINEGRCh38
GRCh371560,372,221 - 60,372,222RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1483531_HHumanautism spectrum disorder  IAGPrs8032150405850206 GWAS_CATALOGPMID:28641744
GWAS1483531_HHumanobsessive-compulsive disorder  IAGPrs8032150405850206 GWAS_CATALOGPMID:28641744

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1483531_HHumanAutistic behavior  IAGPrs8032150405850206 GWAS_CATALOGPMID:28641744
GWAS1483531_HHumanCompulsive behaviors  IAGPrs8032150405850206 GWAS_CATALOGPMID:28641744
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1483531_HHumanautism spectrum disorder  IAGPrs8032150405850206 GWAS_CATALOGPMID:28641744
GWAS1483531_HHumanobsessive-compulsive disorder  IAGPrs8032150405850206 GWAS_CATALOGPMID:28641744

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs8032150)
Human AssemblyChrPosition (strand)Source
GRCh381560,080,022 - 60,080,023RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
597387457GWAS1483531_Hobsessive-compulsive disorder, autism spectrum disorder QTL GWAS1483531 (human)0.000007obsessive-compulsive disorder, autism spectrum disorder156008002260080023Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1483531_H GCST004703 Obsessive-compulsive disorder or autism spectrum disorder 2,998 European ancestry obsessive-compulsive disorder cases, 6,898 European ancestry autism spectrum disorder cases C NR 0.000007 5.155 rs8032150 59.4319 obsessive-compulsive disorder (EFO:0004242)
autism spectrum disorder (EFO:0003756)
 PMID:28641744
Database
Acc Id
Source(s)
GWAS Catalog GCST004703 GWAS Catalog

Note Type Note Reference