GWAS1460050_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1460050_H (self reported educational attainment QTL GWAS1460050 (human)) Homo sapiens

Symbol: GWAS1460050_H
Name: self reported educational attainment QTL GWAS1460050 (human)
RGD ID: 597363976
Trait: self reported educational attainment
LOD Score: Not Available
P Value: 3.0E-12
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38614,723,377 - 14,723,378RGD_MAPPER_PIPELINEGRCh38
GRCh37614,723,608 - 14,723,609RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1460050_HHumanself reported educational attainment  IAGPrs7776010405850206 GWAS_CATALOGPMID:27225129

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs7776010)
Human AssemblyChrPosition (strand)Source
GRCh38614,723,377 - 14,723,378RGD_MAPPER_PIPELINE


1 to 10 of 13 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2289408BW324_HBody weight QTL 324 (human)3.150.0001Body fat amount6120803913Human
1643418BW282_HBody Weight QTL 282 (human)2.070.001Body weight6119321359Human
1643377BW325_HBody weight QTL 325 (human)2.320.0005Body fat amount6691196032911960Human
1643569GLUCO21_HGlucose level QTL 21 (human)0.021Glucose levelnon-insulin-dependent6691196032911960Human
1298458BW9_HBody weight QTL 9 (human)2.70.0002Body fat amount6691196032911960Human
2289320BW390_HBody weight QTL 390 (human)2.13Body weightBMI6119321359Human
1358854MULTSCL4_HMultiple sclerosis susceptibility QTL 4 (human)Multiple sclerosis susceptibility6691196032911960Human
597363976GWAS1460050_Hself reported educational attainment QTL GWAS1460050 (human)3e-12self reported educational attainment61472337714723378Human
2289435BMD4_HBone mineral density QTL 4 (human)3.150.0001Bone mineral density6120803913Human
2292824PRSTS5_HProstate tumor susceptibility QTL 5 (human)Prostate tumor susceptibility6119232373Human

1 to 10 of 13 rows


Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1460050_H GCST003676 Educational attainment (years of education) 405,072 European ancestry individuals T 0.8167 3E-12 11.523 rs7776010 0.021022316 self reported educational attainment (EFO:0004784)
 PMID:27225129
GWAS1454955_H GCST003677 Educational attainment (college completion) 280,007 European ancestry individuals ? 0.1791 9E-9 8.046 rs7776010 1.0476757 self reported educational attainment (EFO:0004784)
 PMID:27225129
Database
Acc Id
Source(s)
GWAS Catalog GCST003676 GWAS Catalog

Note Type Note Reference