GWAS1444145_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1444145_H (Abdominal Aortic Aneurysm QTL GWAS1444145 (human)) Homo sapiens

Symbol: GWAS1444145_H
Name: Abdominal Aortic Aneurysm QTL GWAS1444145 (human)
RGD ID: 597348071
Trait: Abdominal Aortic Aneurysm
LOD Score: Not Available
P Value: 8.0E-11
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381548,436,833 - 48,436,834RGD_MAPPER_PIPELINEGRCh38
GRCh371548,729,030 - 48,729,031RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1444145_HHumanabdominal aortic aneurysm  IAGPrs363820405850206 GWAS_CATALOGPMID:37845353

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1444145_HHumanAbdominal aortic aneurysm  IAGPrs363820405850206 GWAS_CATALOGPMID:37845353
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1444145_HHumanAbdominal Aortic Aneurysm  IAGPrs363820405850206 GWAS_CATALOGPMID:37845353

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
731577FBN1fibrillin 1154840831348645709Human


Peak: (rs363820)
Human AssemblyChrPosition (strand)Source
GRCh381548,436,833 - 48,436,834RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1643273BW330_HBody Weight QTL 330 (human)1.050.014Body weightbody mass index152686671952866719Human
1559411SCL107_HSerum cholesterol level QTL 107 (human)3.88Lipid leveltriglyceride152654355252543552Human
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human
597348071GWAS1444145_HAbdominal Aortic Aneurysm QTL GWAS1444145 (human)8e-11Abdominal Aortic Aneurysm154843683348436834Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1444145_H GCST90432152 Abdominal aortic aneurysm 37,214 European ancestry cases, 997,776 European ancestry controls, 2,007 African ancestry cases, 88,331 African ancestry controls ? NR 8E-11 10.097 rs363820 0.0856 Abdominal Aortic Aneurysm (EFO:0004214)
 PMID:37845353
GWAS1763681_H GCST90245848 Height 5,314,291 European ancestry, Hispanic or Latin American, East Asian ancestry, African ancestry, South Asian ancestry individuals C 0.096 4E-237 236.398 rs363820 0.0344 body height (OBA:VT0001253)
 PMID:36224396
GWAS1782060_H GCST90245846 Height 293,593 African ancestry individuals C 0.16228 1E-12 12 rs363820 0.03014 body height (OBA:VT0001253)
 PMID:36224396
Database
Acc Id
Source(s)
GWAS Catalog GCST90432152 GWAS Catalog

Note Type Note Reference