GWAS1442895_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1442895_H (FEV/FVC ratio QTL GWAS1442895 (human)) Homo sapiens

Symbol: GWAS1442895_H
Name: FEV/FVC ratio QTL GWAS1442895 (human)
RGD ID: 597346821
Trait: FEV/FVC ratio
Measurement Type: forced expiratory volume to forced vital capacity ratio   (CMO:0000241)    
LOD Score: Not Available
P Value: 3.0E-25
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38311,610,857 - 11,610,858RGD_MAPPER_PIPELINEGRCh38
GRCh37311,652,331 - 11,652,332RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1442895_HHumanforced expiratory volume to forced vital capacity ratio  IAGPrs2442777405850206 GWAS_CATALOGPMID:36914875

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1442895_HHumanFEV/FVC ratio  IAGPrs2442777405850206 GWAS_CATALOGPMID:36914875

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1323223VGLL4vestigial like family member 431155606711721815Human


Peak: (rs2442777)
Human AssemblyChrPosition (strand)Source
GRCh38311,610,857 - 11,610,858RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2316345GLUCO224_HGlucose level QTL 224 (human)1.270.008Glucose level3121543441Human
597346821GWAS1442895_HFEV/FVC ratio QTL GWAS1442895 (human)3e-25FEV/FVC ratioforced expiratory volume to forced vital capacity ratio (CMO:0000241)31161085711610858Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1442895_H GCST90244094 Lung function (FEV1/FVC) 475,645 European ancestry individuals, 8,590 African ancestry individuals, 85,279 East Asian ancestry individuals, 4,270 South Asian ancestry individuals, 14,668 Hispanic or Latin American individuals A 0.667 3E-25 24.523 rs2442777 10.399 FEV/FVC ratio (EFO:0004713)
 PMID:36914875
Database
Acc Id
Source(s)
GWAS Catalog GCST90244094 GWAS Catalog

Note Type Note Reference