GWAS1435078_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1435078_H (respiratory failure, COVID-19 QTL GWAS1435078 (human)) Homo sapiens

Symbol: GWAS1435078_H
Name: respiratory failure, COVID-19 QTL GWAS1435078 (human)
RGD ID: 597339004
Trait: respiratory failure, COVID-19
LOD Score: Not Available
P Value: 9.0E-7
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381730,409,086 - 30,409,087RGD_MAPPER_PIPELINEGRCh38
GRCh371728,736,104 - 28,736,105RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1435078_HHumanCOVID-19  IAGPrs141167135405850206Based on the MONDO term ID from GWASGWAS_CATALOGPMID:35848942
GWAS1435078_HHumanrespiratory failure  IAGPrs141167135405850206 GWAS_CATALOGPMID:35848942

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1435078_HHumanrespiratory failure  IAGPrs141167135405850206 GWAS_CATALOGPMID:35848942

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
731463CPDcarboxypeptidase D173037892730469989Human


Peak: (rs141167135)
Human AssemblyChrPosition (strand)Source
GRCh381730,409,086 - 30,409,087RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298406BP16_HBlood pressure QTL 16 (human)0.0004Blood pressurehypertension susceptibility171477864740778647Human
597339004GWAS1435078_Hrespiratory failure, COVID-19 QTL GWAS1435078 (human)0.0000009respiratory failure, COVID-19173040908630409087Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1435078_H GCST90278685 COVID-19 with respiratory failure requiring mechanical ventilation 1,911 European ancestry cases, 12,226 European ancestry controls C 0.011 9E-7 6.046 rs141167135 3.0565903 respiratory failure (EFO:0009686)
 PMID:35848942
GWAS1788533_H GCST90267284 Height (standard GWA) 283,749 European ancestry individuals C NR 1E-8 8 rs141167135 0.37976 body height (OBA:VT0001253)
 PMID:37106081
Database
Acc Id
Source(s)
GWAS Catalog GCST90278685 GWAS Catalog

Note Type Note Reference