GWAS1432464_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1432464_H (COVID-19 QTL GWAS1432464 (human)) Homo sapiens

Symbol: GWAS1432464_H
Name: COVID-19 QTL GWAS1432464 (human)
RGD ID: 597336390
Trait: COVID-19
LOD Score: Not Available
P Value: 2.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381557,556,737 - 57,556,738RGD_MAPPER_PIPELINEGRCh38
GRCh371557,848,935 - 57,848,936RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1432464_HHumanCOVID-19  IAGPrs2922230405850206Based on the MONDO term ID from GWASGWAS_CATALOGPMID:35224516


#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs2922230)
Human AssemblyChrPosition (strand)Source
GRCh381557,556,737 - 57,556,738RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
597336390GWAS1432464_HCOVID-19 QTL GWAS1432464 (human)0.000002COVID-19155755673757556738Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1432464_H GCST90104747 COVID-19 (hospitalized vs tested, not hospitalized) 376 South Asian, African or unknown ancestry cases, 6,163 South Asian, African or unknown ancestry controls G 0.71742006 0.000002 5.699 rs2922230 0.4211 PMID:35224516
Database
Acc Id
Source(s)
GWAS Catalog GCST90104747 GWAS Catalog

Note Type Note Reference