GWAS1428793_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1428793_H (R-6-hydroxywarfarin measurement QTL GWAS1428793 (human)) Homo sapiens

Symbol: GWAS1428793_H
Name: R-6-hydroxywarfarin measurement QTL GWAS1428793 (human)
RGD ID: 597332719
Trait: R-6-hydroxywarfarin measurement
LOD Score: Not Available
P Value: 8.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38177,700,066 - 7,700,067RGD_MAPPER_PIPELINEGRCh38
GRCh37177,603,384 - 7,603,385RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1428793_HHumanR-6-hydroxywarfarin measurement  IAGPrs183294622405850206 GWAS_CATALOGPMID:36210801

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1605665WRAP53WD repeat containing antisense to TP531776860717703502Human


Peak: (rs183294622)
Human AssemblyChrPosition (strand)Source
GRCh38177,700,066 - 7,700,067RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597332719GWAS1428793_HR-6-hydroxywarfarin measurement QTL GWAS1428793 (human)8e-08R-6-hydroxywarfarin measurement1777000667700067Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1428793_H GCST90129566 R-6-hydroxywarfarin levels 377 Sub-Saharan African ancestry individuals ? NR 8E-8 7.097 rs183294622 0.87674 R-6-hydroxywarfarin measurement (EFO:0803327)
 PMID:36210801
Database
Acc Id
Source(s)
GWAS Catalog GCST90129566 GWAS Catalog

Note Type Note Reference