GWAS1423118_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1423118_H (color vision disorder QTL GWAS1423118 (human)) Homo sapiens

Symbol: GWAS1423118_H
Name: color vision disorder QTL GWAS1423118 (human)
RGD ID: 597327044
Trait: color vision disorder
LOD Score: Not Available
P Value: 8.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38998,404,916 - 98,404,917RGD_MAPPER_PIPELINEGRCh38
GRCh379101,167,198 - 101,167,199RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
731754GABBR2gamma-aminobutyric acid type B receptor subunit 299828810998708935Human


Peak: (rs190261330)
Human AssemblyChrPosition (strand)Source
GRCh38998,404,916 - 98,404,917RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597327044GWAS1423118_Hcolor vision disorder QTL GWAS1423118 (human)8e-08color vision disorder99840491698404917Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1423118_H GCST90301671 Color vision defects (Tritan) 12 Silk Road (founder/genetic isolate) cases, 508 Silk Road (founder/genetic isolate) controls G 0.98 8E-8 7.097 rs190261330 0.2449267 PMID:37359372
Database
Acc Id
Source(s)
GWAS Catalog GCST90301671 GWAS Catalog

Note Type Note Reference