GWAS1411249_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1411249_H (uric acid measurement QTL GWAS1411249 (human)) Homo sapiens

Symbol: GWAS1411249_H
Name: uric acid measurement QTL GWAS1411249 (human)
RGD ID: 597315175
Trait: uric acid measurement
Measurement Type: blood uric acid level   (CMO:0000501)    
LOD Score: Not Available
P Value: 7.0E-9
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381550,662,081 - 50,662,082RGD_MAPPER_PIPELINEGRCh38
GRCh371550,954,278 - 50,954,279RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1411249_HHumanblood uric acid level  IAGPrs2414064405850206 GWAS_CATALOGPMID:34594039

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1411249_HHumanuric acid measurement  IAGPrs2414064405850206 GWAS_CATALOGPMID:34594039

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1353386TRPM7transient receptor potential cation channel subfamily M member 7155055715850686797Human
155791572LOC128092252uncharacterized LOC128092252155064880250686717Human


Peak: (rs2414064)
Human AssemblyChrPosition (strand)Source
GRCh381550,662,081 - 50,662,082RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1643273BW330_HBody Weight QTL 330 (human)1.050.014Body weightbody mass index152686671952866719Human
1559411SCL107_HSerum cholesterol level QTL 107 (human)3.88Lipid leveltriglyceride152654355252543552Human
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human
597315175GWAS1411249_Huric acid measurement QTL GWAS1411249 (human)7e-09uric acid measurementblood uric acid level (CMO:0000501)155066208150662082Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1411249_H GCST90018977 Serum uric acid levels 343,836 European ancestry individuals, 129,405 East Asian ancestry individuals A NR 7E-9 8.155 rs2414064 0.0144 uric acid measurement (EFO:0004761)
 PMID:34594039
Database
Acc Id
Source(s)
GWAS Catalog GCST90018977 GWAS Catalog

Note Type Note Reference