GWAS1404932_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1404932_H (Drugs used in diabetes use measurement QTL GWAS1404932 (human)) Homo sapiens

Symbol: GWAS1404932_H
Name: Drugs used in diabetes use measurement QTL GWAS1404932 (human)
RGD ID: 597308858
Trait: Drugs used in diabetes use measurement
LOD Score: Not Available
P Value: 6.0E-11
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381540,345,421 - 40,345,422RGD_MAPPER_PIPELINEGRCh38
GRCh371540,637,622 - 40,637,623RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1404932_HHumanDrugs used in diabetes use measurement  IAGPrs1898885405850206 GWAS_CATALOGPMID:34594039

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
155773735LOC127829306H3K4me1 hESC enhancer GRCh37_chr15:40637262-40637858154034506140345657Human


Peak: (rs1898885)
Human AssemblyChrPosition (strand)Source
GRCh381540,345,421 - 40,345,422RGD_MAPPER_PIPELINE


1 to 9 of 9 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2289410BW327_HBody weight QTL 327 (human)3.320.0001Body fat amount151998012945980129Human
1643273BW330_HBody Weight QTL 330 (human)1.050.014Body weightbody mass index152686671952866719Human
597308858GWAS1404932_HDrugs used in diabetes use measurement QTL GWAS1404932 (human)6e-11Drugs used in diabetes use measurement154034542140345422Human
2289430BMD7_HBone mineral density QTL 7 (human)3.320.0001Bone mineral density151998012945980129Human
1559411SCL107_HSerum cholesterol level QTL 107 (human)3.88Lipid leveltriglyceride152654355252543552Human
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
1643523BW284_HBody Weight QTL 284 (human)1.950.0013Body weight152179288947792889Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human
2289420BW314_HBody weight QTL 314 (human)2.720.0003Body weightlean mass151998012945980129Human

1 to 9 of 9 rows


Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1404932_H GCST90018981 Medication use (drugs used in diabetes) 15,272 European ancestry cases, 290,641 European ancestry controls, 30,515 East Asian ancestry cases, 148,211 East Asian ancestry controls C NR 6E-11 10.222 rs1898885 0.0677 Drugs used in diabetes use measurement (EFO:0009924)
 PMID:34594039
Database
Acc Id
Source(s)
GWAS Catalog GCST90018981 GWAS Catalog

Note Type Note Reference