GWAS1394291_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1394291_H (cardiac troponin T measurement QTL GWAS1394291 (human)) Homo sapiens

Symbol: GWAS1394291_H
Name: cardiac troponin T measurement QTL GWAS1394291 (human)
RGD ID: 597298217
Trait: cardiac troponin T measurement
Measurement Type: blood troponin T level   (CMO:0001284)    
LOD Score: Not Available
P Value: 2.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh382047,114,062 - 47,114,063RGD_MAPPER_PIPELINEGRCh38
GRCh372045,742,701 - 45,742,702RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1394291_HHumanblood troponin T level  IAGPrs6066206405850206 GWAS_CATALOGPMID:34732054

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1394291_HHumancardiac troponin T measurement  IAGPrs6066206405850206 GWAS_CATALOGPMID:34732054

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1350703EYA2EYA transcriptional coactivator and phosphatase 2204689484347188844Human


Peak: (rs6066206)
Human AssemblyChrPosition (strand)Source
GRCh382047,114,062 - 47,114,063RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597298217GWAS1394291_Hcardiac troponin T measurement QTL GWAS1394291 (human)0.000002cardiac troponin T measurementblood troponin T level (CMO:0001284)204711406247114063Human
1300007BP29_HBlood pressure QTL 29 (human)Blood pressurehypertension susceptibility203653600562536005Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1394291_H GCST90095178 High-sensitivity cardiac troponin T levels 774 Chinese ancestry individuals ? NR 0.000002 5.699 rs6066206 0.21 cardiac troponin T measurement (EFO:0005043)
 PMID:34732054
Database
Acc Id
Source(s)
GWAS Catalog GCST90095178 GWAS Catalog

Note Type Note Reference