GWAS1366720_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1366720_H (pulse pressure measurement QTL GWAS1366720 (human)) Homo sapiens

Symbol: GWAS1366720_H
Name: pulse pressure measurement QTL GWAS1366720 (human)
RGD ID: 597270646
Trait: pulse pressure measurement
Measurement Type: pulse pressure   (CMO:0000292)    
LOD Score: Not Available
P Value: 4.0E-14
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3811,752,461 - 1,752,462RGD_MAPPER_PIPELINEGRCh38
GRCh3711,683,900 - 1,683,901RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1366720_HHumanpulse pressure  IAGPrs1062090405850206 GWAS_CATALOGPMID:35762941

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1366720_HHumanpulse pressure measurement  IAGPrs1062090405850206 GWAS_CATALOGPMID:35762941

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1606514NADKNAD kinase117512321780514Human


Peak: (rs1062090)
Human AssemblyChrPosition (strand)Source
GRCh3811,752,461 - 1,752,462RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
596968711GWAS1088230_Hsystolic blood pressure QTL GWAS1088230 (human)7e-14systolic blood pressure117524611752462Human
597317632GWAS1413706_Hsystolic blood pressure QTL GWAS1413706 (human)7e-14systolic blood pressuresystolic blood pressure (CMO:0000004)117524611752462Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
597270646GWAS1366720_Hpulse pressure measurement QTL GWAS1366720 (human)4e-14pulse pressure measurementpulse pressure (CMO:0000292)117524611752462Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1366720_H GCST90132905 Pulse pressure 526,001 European ancestry individuals A NR 4E-14 13.398 rs1062090 0.2004 pulse pressure measurement (EFO:0005763)
 PMID:35762941
GWAS1413706_H GCST90435415 Systolic blood pressure 404,507 European ancestry individuals ? NR 7E-14 13.155 rs1062090 0.0145047 systolic blood pressure (EFO:0006335)
 PMID:39134668
Database
Acc Id
Source(s)
GWAS Catalog GCST90132905 GWAS Catalog

Note Type Note Reference