GWAS1362708_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1362708_H (eosinophil count QTL GWAS1362708 (human)) Homo sapiens

Symbol: GWAS1362708_H
Name: eosinophil count QTL GWAS1362708 (human)
RGD ID: 597266634
Trait: eosinophil quantity   (VT:0002602)    
Measurement Type: blood eosinophil count   (CMO:0000033)    
LOD Score: Not Available
P Value: 4.0E-38
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381611,071,685 - 11,071,686RGD_MAPPER_PIPELINEGRCh38
GRCh371611,165,542 - 11,165,543RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1362708_HHumanblood eosinophil count  IAGPrs7184615405850206 GWAS_CATALOGPMID:35935937

Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1362708_HHumaneosinophil quantity  IAGPrs7184615405850206 GWAS_CATALOGPMID:35935937

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1362708_HHumaneosinophil count  IAGPrs7184615405850206 GWAS_CATALOGPMID:35935937

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1604037CLEC16AC-type lectin domain containing 16A161094456411182186Human


Peak: (rs7184615)
Human AssemblyChrPosition (strand)Source
GRCh381611,071,685 - 11,071,686RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597266634GWAS1362708_Heosinophil count QTL GWAS1362708 (human)4e-38eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)161107168511071686Human
597282964GWAS1379038_Heosinophil count QTL GWAS1379038 (human)6e-76eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)161107168511071686Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1362708_H GCST90134621 Eosinophil counts 365,954 British ancestry individuals C 0.293 4E-38 37.398 rs7184615 0.05 eosinophil count (EFO:0004842)
 PMID:35935937
GWAS1379038_H GCST90018953 Eosinophil counts 349,856 European ancestry individuals, 93,063 East Asian ancestry individuals C NR 6E-76 75.222 rs7184615 0.0322 eosinophil count (EFO:0004842)
 PMID:34594039
Database
Acc Id
Source(s)
GWAS Catalog GCST90134621 GWAS Catalog

Note Type Note Reference