GWAS1361958_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1361958_H (BMI-adjusted waist circumference QTL GWAS1361958 (human)) Homo sapiens

Symbol: GWAS1361958_H
Name: BMI-adjusted waist circumference QTL GWAS1361958 (human)
RGD ID: 597265884
Trait: body size trait   (VT:0100005)    
LOD Score: Not Available
P Value: 7.0E-9
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38117,086,964 - 17,086,965RGD_MAPPER_PIPELINEGRCh38
GRCh37117,413,459 - 17,413,460RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1361958_HHumanbody size trait  IAGPrs2076614405850206 GWAS_CATALOGPMID:34021172

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1361958_HHumanBMI-adjusted waist circumference  IAGPrs2076614405850206 GWAS_CATALOGPMID:34021172

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1348232PADI2peptidyl arginine deiminase 211706676117119451Human


Peak: (rs2076614)
Human AssemblyChrPosition (strand)Source
GRCh38117,086,964 - 17,086,965RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
597265884GWAS1361958_HBMI-adjusted waist circumference QTL GWAS1361958 (human)7e-09body size trait (VT:0100005)11708696417086965Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1361958_H GCST90020029 Waist circumference adjusted for body mass index 219,872 British ancestry women A NR 7E-9 8.155 rs2076614 0.0185972 BMI-adjusted waist circumference (EFO:0007789)
 PMID:34021172
Database
Acc Id
Source(s)
GWAS Catalog GCST90020029 GWAS Catalog

Note Type Note Reference