GWAS1359228_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1359228_H (educational attainment QTL GWAS1359228 (human)) Homo sapiens

Symbol: GWAS1359228_H
Name: educational attainment QTL GWAS1359228 (human)
RGD ID: 597263154
Trait: educational attainment
LOD Score: Not Available
P Value: 1.0E-16
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38111,480,592 - 11,480,593RGD_MAPPER_PIPELINEGRCh38
GRCh37111,540,649 - 11,540,650RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1359228_HHumaneducational attainment  IAGPrs58130172405850206 GWAS_CATALOGPMID:35361970

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1603018DISP3dispatched RND transporter family member 311147915511537551Human


Peak: (rs58130172)
Human AssemblyChrPosition (strand)Source
GRCh38111,480,592 - 11,480,593RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
597145071GWAS1241145_Hself reported educational attainment QTL GWAS1241145 (human)3e-08self reported educational attainment11148059211480593Human
597263154GWAS1359228_Heducational attainment QTL GWAS1359228 (human)1e-16educational attainment11148059211480593Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1359228_H GCST90105038 Educational attainment 3,037,499 European ancestry individuals T 0.278 1E-16 16 rs58130172 0.00975869 educational attainment (EFO:0011015)
 PMID:35361970
GWAS1241145_H GCST90267280 Age when finished full-time education (standard GWA) 283,749 European ancestry individuals T NR 3E-8 7.523 rs58130172 0.028265 self reported educational attainment (EFO:0004784)
 PMID:37106081
GWAS1792395_H GCST90492679 SIOPS occupational score (MTAG) 271,769 British ancestry individuals ? NR 7E-10 9.155 rs58130172 0.011013149 socioeconomic status (EFO:0022866)
 PMID:39715877
GWAS1799824_H GCST90492678 CAMSIS occupational score (MTAG) 273,157 British ancestry individuals ? NR 3E-10 9.523 rs58130172 0.012523993 socioeconomic status (EFO:0022866)
 PMID:39715877
GWAS1800813_H GCST90492677 ISEI occupational score (MTAG) 271,769 British ancestry individuals ? NR 5E-10 9.302 rs58130172 0.011389096 socioeconomic status (EFO:0022866)
 PMID:39715877
Database
Acc Id
Source(s)
GWAS Catalog GCST90105038 GWAS Catalog

Note Type Note Reference