GWAS1357551_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1357551_H (BMI-adjusted hip circumference QTL GWAS1357551 (human)) Homo sapiens

Symbol: GWAS1357551_H
Name: BMI-adjusted hip circumference QTL GWAS1357551 (human)
RGD ID: 597261477
Trait: BMI-adjusted hip circumference
Measurement Type: hip circumference   (CMO:0000014)    
LOD Score: Not Available
P Value: 2.0E-15
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38116,975,177 - 16,975,178RGD_MAPPER_PIPELINEGRCh38
GRCh37117,301,672 - 17,301,673RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1357551_HHumanhip circumference  IAGPrs761423405850206 GWAS_CATALOGPMID:34021172

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1357551_HHumanBMI-adjusted hip circumference  IAGPrs761423405850206 GWAS_CATALOGPMID:34021172

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
155635603LOC127267741H3K4me1 hESC enhancer GRCh37_chr1:17300945-1730175211697445016975257Human
1314413MFAP2microfibril associated protein 211697450216981583Human


Peak: (rs761423)
Human AssemblyChrPosition (strand)Source
GRCh38116,975,177 - 16,975,178RGD_MAPPER_PIPELINE


1 to 10 of 11 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
597031396GWAS1127470_Hbody mass index QTL GWAS1127470 (human)7e-10body mass indexbody mass index (BMI) (CMO:0000105)11697517716975178Human
407009972GWAS658948_Hbody mass index QTL GWAS658948 (human)2e-08body mass indexbody mass index (BMI) (CMO:0000105)11697517716975178Human
597241935GWAS1338009_HBMI-adjusted waist circumference QTL GWAS1338009 (human)6e-11body size trait (VT:0100005)11697517716975178Human
597254590GWAS1350664_HBMI-adjusted waist circumference QTL GWAS1350664 (human)1e-12body size trait (VT:0100005)11697517716975178Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
597261477GWAS1357551_HBMI-adjusted hip circumference QTL GWAS1357551 (human)2e-15BMI-adjusted hip circumferencehip circumference (CMO:0000014)11697517716975178Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human

1 to 10 of 11 rows


Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1357551_H GCST012227 Hip circumference adjusted for BMI 186,825 British ancestry men C NR 2E-15 14.699 rs761423 0.0243503 BMI-adjusted hip circumference (EFO:0008039)
 PMID:34021172
GWAS1127470_H GCST009004 Body mass index 806,834 European ancestry individuals T 0.5412 7E-10 9.155 rs761423 0.0105 body mass index (EFO:0004340)
 PMID:30239722
GWAS658948_H GCST009871 Body mass index 457,822 European ancestry individuals ? NR 2E-8 7.699 rs761423 N/A body mass index (EFO:0004340)
 PMID:31669095
None Available GCST90179150 Body mass index (MTAG) 694,649 European ancestry individuals T NR 7E-10 9.155 rs761423 0.0105 body mass index (EFO:0004340)
 PMID:36376304
GWAS1338009_H GCST90020024 A body shape index 219,872 British ancestry women C NR 6E-11 10.222 rs761423 0.0187203 BMI-adjusted waist circumference (EFO:0007789)
 PMID:34021172
GWAS1350664_H GCST012226 Waist circumference adjusted for body mass index 186,825 British ancestry men C NR 1E-12 12 rs761423 0.0219833 BMI-adjusted waist circumference (EFO:0007789)
 PMID:34021172
GWAS1361950_H GCST90020029 Waist circumference adjusted for body mass index 219,872 British ancestry women C NR 1E-19 19 rs761423 0.0258364 BMI-adjusted waist circumference (EFO:0007789)
 PMID:34021172
Database
Acc Id
Source(s)
GWAS Catalog GCST012227 GWAS Catalog

Note Type Note Reference