GWAS1344727_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1344727_H (neuroticism measurement QTL GWAS1344727 (human)) Homo sapiens

Symbol: GWAS1344727_H
Name: neuroticism measurement QTL GWAS1344727 (human)
RGD ID: 597248653
Trait: neuroticism measurement
LOD Score: Not Available
P Value: 4.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh382137,472,458 - 37,472,459RGD_MAPPER_PIPELINEGRCh38
GRCh372138,844,760 - 38,844,761RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1344727_HHumanneuroticism measurement  IAGPrs17229402405850206 GWAS_CATALOGPMID:33349686

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
737237DYRK1Adual specificity tyrosine phosphorylation regulated kinase 1A213736557337526358Human


Peak: (rs17229402)
Human AssemblyChrPosition (strand)Source
GRCh382137,472,458 - 37,472,459RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597248653GWAS1344727_Hneuroticism measurement QTL GWAS1344727 (human)4e-08neuroticism measurement213747245837472459Human
597249150GWAS1345224_Hneuroticism measurement QTL GWAS1345224 (human)5e-08neuroticism measurement213747245837472459Human
2303081MAMTS49_HMammary tumor susceptibility QTL 49 (human)1.72Mammary tumor susceptibility211795044843950448Human
597247877GWAS1343951_Hneuroticism measurement QTL GWAS1343951 (human)2e-08neuroticism measurement213747245837472459Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1344727_H GCST90027239 Neuroticism conditioned on cognitive performance (multi-trait conditioning and joint analysis) 170,911 European ancestry individuals ? NR 4E-8 7.398 rs17229402 N/A neuroticism measurement (EFO:0007660)
 PMID:33349686
GWAS1343951_H GCST90027240 Neuroticism conditioned on Townsend deprivation index (multi-trait conditioning and joint analysis) 170,911 European ancestry individuals ? NR 2E-8 7.699 rs17229402 N/A neuroticism measurement (EFO:0007660)
 PMID:33349686
GWAS1345224_H GCST90027241 Neuroticism conditioned on educational attainment (multi-trait conditioning and joint analysis) 170,911 European ancestry individuals ? NR 5E-8 7.302 rs17229402 N/A neuroticism measurement (EFO:0007660)
 PMID:33349686
Database
Acc Id
Source(s)
GWAS Catalog GCST90027239 GWAS Catalog

Note Type Note Reference