GWAS1343888_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1343888_H (BMI-adjusted waist-hip ratio QTL GWAS1343888 (human)) Homo sapiens

Symbol: GWAS1343888_H
Name: BMI-adjusted waist-hip ratio QTL GWAS1343888 (human)
RGD ID: 597247814
Trait: body size trait   (VT:0100005)    
LOD Score: Not Available
P Value: 1.0E-9
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3867,159,781 - 7,159,782RGD_MAPPER_PIPELINEGRCh38
GRCh3767,160,014 - 7,160,015RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1343888_HHumanbody size trait  IAGPrs4959426405850206 GWAS_CATALOGPMID:34021172

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1343888_HHumanBMI-adjusted waist-hip ratio  IAGPrs4959426405850206 GWAS_CATALOGPMID:34021172

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1322078RREB1ras responsive element binding protein 1671077437251980Human


Peak: (rs4959426)
Human AssemblyChrPosition (strand)Source
GRCh3867,159,781 - 7,159,782RGD_MAPPER_PIPELINE


1 to 10 of 13 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2289408BW324_HBody weight QTL 324 (human)3.150.0001Body fat amount6120803913Human
1643418BW282_HBody Weight QTL 282 (human)2.070.001Body weight6119321359Human
1643377BW325_HBody weight QTL 325 (human)2.320.0005Body fat amount6691196032911960Human
1643569GLUCO21_HGlucose level QTL 21 (human)0.021Glucose levelnon-insulin-dependent6691196032911960Human
597218704GWAS1314778_HBMI-adjusted waist-hip ratio QTL GWAS1314778 (human)2e-09body size trait (VT:0100005)671597817159782Human
1298458BW9_HBody weight QTL 9 (human)2.70.0002Body fat amount6691196032911960Human
2289320BW390_HBody weight QTL 390 (human)2.13Body weightBMI6119321359Human
1358854MULTSCL4_HMultiple sclerosis susceptibility QTL 4 (human)Multiple sclerosis susceptibility6691196032911960Human
2289435BMD4_HBone mineral density QTL 4 (human)3.150.0001Bone mineral density6120803913Human
2292824PRSTS5_HProstate tumor susceptibility QTL 5 (human)Prostate tumor susceptibility6119232373Human

1 to 10 of 13 rows


Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1343888_H GCST012228 Waist-hip index 186,825 British ancestry men G NR 1E-9 9 rs4959426 0.0192405 BMI-adjusted waist-hip ratio (EFO:0007788)
 PMID:34021172
GWAS1314778_H GCST012230 Waist-to-hip ratio adjusted for BMI 186,825 British ancestry men G NR 2E-9 8.699 rs4959426 0.0188187 BMI-adjusted waist-hip ratio (EFO:0007788)
 PMID:34021172
Database
Acc Id
Source(s)
GWAS Catalog GCST012228 GWAS Catalog

Note Type Note Reference