GWAS1343480_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1343480_H (BMI-adjusted waist-hip ratio QTL GWAS1343480 (human)) Homo sapiens

Symbol: GWAS1343480_H
Name: BMI-adjusted waist-hip ratio QTL GWAS1343480 (human)
RGD ID: 597247406
Trait: body size trait   (VT:0100005)    
LOD Score: Not Available
P Value: 2.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh382046,915,218 - 46,915,219RGD_MAPPER_PIPELINEGRCh38
GRCh372045,543,857 - 45,543,858RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1343480_HHumanbody size trait  IAGPrs113377538405850206 GWAS_CATALOGPMID:34021172

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1343480_HHumanBMI-adjusted waist-hip ratio  IAGPrs113377538405850206 GWAS_CATALOGPMID:34021172

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1350703EYA2EYA transcriptional coactivator and phosphatase 2204689484347188844Human


Peak: (rs113377538)
Human AssemblyChrPosition (strand)Source
GRCh382046,915,218 - 46,915,219RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597254585GWAS1350659_HBMI-adjusted waist-hip ratio QTL GWAS1350659 (human)1e-08body size trait (VT:0100005)204691521846915219Human
1300007BP29_HBlood pressure QTL 29 (human)Blood pressurehypertension susceptibility203653600562536005Human
597247406GWAS1343480_HBMI-adjusted waist-hip ratio QTL GWAS1343480 (human)2e-08body size trait (VT:0100005)204691521846915219Human
597055643GWAS1151717_HBMI-adjusted waist-hip ratio QTL GWAS1151717 (human)7e-12body size trait (VT:0100005)204691521846915219Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1343480_H GCST012230 Waist-to-hip ratio adjusted for BMI 186,825 British ancestry men T NR 2E-8 7.699 rs113377538 0.0379727 BMI-adjusted waist-hip ratio (EFO:0007788)
 PMID:34021172
GWAS1151717_H GCST009858 Waist-to-hip ratio adjusted for BMI 457,690 European ancestry individuals ? NR 7E-12 11.155 rs113377538 N/A BMI-adjusted waist-hip ratio (EFO:0007788)
 PMID:31669095
GWAS1350659_H GCST012228 Waist-hip index 186,825 British ancestry men T NR 1E-8 8 rs113377538 0.0387345 BMI-adjusted waist-hip ratio (EFO:0007788)
 PMID:34021172
Database
Acc Id
Source(s)
GWAS Catalog GCST012230 GWAS Catalog

Note Type Note Reference