GWAS1341424_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1341424_H (glucose measurement QTL GWAS1341424 (human)) Homo sapiens

Symbol: GWAS1341424_H
Name: glucose measurement QTL GWAS1341424 (human)
RGD ID: 597245350
Trait: glucose measurement
Measurement Type: blood glucose level   (CMO:0000046)    
LOD Score: Not Available
P Value: 2.0E-10
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3813,190,983 - 3,190,984RGD_MAPPER_PIPELINEGRCh38
GRCh3713,107,547 - 3,107,548RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1341424_HHumanblood glucose level  IAGPrs60330317405850206 GWAS_CATALOGPMID:33462484

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1341424_HHumanglucose measurement  IAGPrs60330317405850206 GWAS_CATALOGPMID:33462484

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1353101PRDM16PR/SET domain 16130692033438621Human
38605325LOC107984909uncharacterized LOC107984909131875583195526Human


Peak: (rs60330317)
Human AssemblyChrPosition (strand)Source
GRCh3813,190,983 - 3,190,984RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
597245350GWAS1341424_Hglucose measurement QTL GWAS1341424 (human)2e-10glucose measurementblood glucose level (CMO:0000046)131909833190984Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1341424_H GCST90019508 Blood glucose levels 313,125 European ancestry individuals, 5,568 African ancestry individuals, 6,693 South Asian ancestry individuals A NR 2E-10 9.699 rs60330317 0.0208 glucose measurement (EFO:0004468)
 PMID:33462484
Database
Acc Id
Source(s)
GWAS Catalog GCST90019508 GWAS Catalog

Note Type Note Reference