GWAS1338925_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1338925_H (BMI-adjusted waist-hip ratio QTL GWAS1338925 (human)) Homo sapiens

Symbol: GWAS1338925_H
Name: BMI-adjusted waist-hip ratio QTL GWAS1338925 (human)
RGD ID: 597242851
Trait: body size trait   (VT:0100005)    
LOD Score: Not Available
P Value: 2.0E-28
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh382046,921,232 - 46,921,233RGD_MAPPER_PIPELINEGRCh38
GRCh372045,549,871 - 45,549,872RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1338925_HHumanbody size trait  IAGPrs4810576405850206 GWAS_CATALOGPMID:34021172

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1338925_HHumanBMI-adjusted waist-hip ratio  IAGPrs4810576405850206 GWAS_CATALOGPMID:34021172

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1350703EYA2EYA transcriptional coactivator and phosphatase 2204689484347188844Human


Peak: (rs4810576)
Human AssemblyChrPosition (strand)Source
GRCh382046,921,232 - 46,921,233RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300007BP29_HBlood pressure QTL 29 (human)Blood pressurehypertension susceptibility203653600562536005Human
597242851GWAS1338925_HBMI-adjusted waist-hip ratio QTL GWAS1338925 (human)2e-28body size trait (VT:0100005)204692123246921233Human
597168902GWAS1264976_HBMI-adjusted waist-hip ratio QTL GWAS1264976 (human)4e-29body size trait (VT:0100005)204692123246921233Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1338925_H GCST90020025 Waist-to-hip ratio adjusted for BMI 219,872 British ancestry women A NR 2E-28 27.699 rs4810576 0.0333526 BMI-adjusted waist-hip ratio (EFO:0007788)
 PMID:34021172
GWAS1264976_H GCST90020027 Waist-hip index 219,872 British ancestry women A NR 4E-29 28.398 rs4810576 0.0337718 BMI-adjusted waist-hip ratio (EFO:0007788)
 PMID:34021172
Database
Acc Id
Source(s)
GWAS Catalog GCST90020025 GWAS Catalog

Note Type Note Reference