GWAS1336559_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1336559_H (educational attainment QTL GWAS1336559 (human)) Homo sapiens

Symbol: GWAS1336559_H
Name: educational attainment QTL GWAS1336559 (human)
RGD ID: 597240485
Trait: educational attainment
LOD Score: Not Available
P Value: 1.0E-11
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3816,807,782 - 6,807,783RGD_MAPPER_PIPELINEGRCh38
GRCh3716,867,842 - 6,867,843RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1336559_HHumaneducational attainment  IAGPrs12735232405850206 GWAS_CATALOGPMID:34855049

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1318785CAMTA1calmodulin binding transcription activator 1167854547769706Human


Peak: (rs12735232)
Human AssemblyChrPosition (strand)Source
GRCh3816,807,782 - 6,807,783RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
597029664GWAS1125738_Hself reported educational attainment QTL GWAS1125738 (human)7e-10self reported educational attainment168077826807783Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
597240485GWAS1336559_Heducational attainment QTL GWAS1336559 (human)1e-11educational attainment168077826807783Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1336559_H GCST90100570 Educational attainment 451,800 European or unknown ancestry individuals ? NR 1E-11 11 rs12735232 N/A educational attainment (EFO:0011015)
 PMID:34855049
GWAS1125738_H GCST007037 Educational attainment (years of education) approximately 455,000 European ancestry individuals ? NR 7E-10 9.155 rs12735232 N/A self reported educational attainment (EFO:0004784)
 PMID:30595370
Database
Acc Id
Source(s)
GWAS Catalog GCST90100570 GWAS Catalog

Note Type Note Reference