GWAS1333831_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1333831_H (cortical thickness QTL GWAS1333831 (human)) Homo sapiens

Symbol: GWAS1333831_H
Name: cortical thickness QTL GWAS1333831 (human)
RGD ID: 597237757
Trait: cortical thickness
LOD Score: Not Available
P Value: 4.0E-15
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38193,283,598 - 3,283,599RGD_MAPPER_PIPELINEGRCh38
GRCh37193,283,596 - 3,283,597RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1333831_HHumancortical thickness  IAGPrs62125949405850206 GWAS_CATALOGPMID:34560273

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1345217CELF5CUGBP Elav-like family member 51932246613297076Human


Peak: (rs62125949)
Human AssemblyChrPosition (strand)Source
GRCh38193,283,598 - 3,283,599RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298499UAE1_HUrinary albumin excretion QTL 1 (human)2.730.0009Urinary albumin excretionurine albumin:creatinine ratio (ACR)19116075902Human
1643451SLIPL6_HSerum lipid level QTL 6 (human)2.190.0008Lipid level19116075902Human
597237757GWAS1333831_Hcortical thickness QTL GWAS1333831 (human)4e-15cortical thickness1932835983283599Human
1581534BP76_HBlood pressure QTL 76 (human)20.001Blood pressurepulse pressure19116075902Human
1581535BP65_HBlood pressure QTL 65 (human)3.10.001Blood pressurepulse pressure19116075902Human
2314591INSUL4_HInsulin level QTL 4 (human)3.80.000038Insulin levelfasting19116075902Human
1298476BP3_HBlood pressure QTL 3 (human)2.4Blood pressuresystolic19116075902Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1333831_H GCST90091061 Cortical thickness 35,657 White British ancestry individuals C 0.1327 4E-15 14.398 rs62125949 N/A cortical thickness (EFO:0004840)
 PMID:34560273
Database
Acc Id
Source(s)
GWAS Catalog GCST90091061 GWAS Catalog

Note Type Note Reference