GWAS1308461_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1308461_H (arterial stiffness measurement QTL GWAS1308461 (human)) Homo sapiens

Symbol: GWAS1308461_H
Name: arterial stiffness measurement QTL GWAS1308461 (human)
RGD ID: 597212387
Trait: arterial stiffness measurement
Measurement Type: pulse wave velocity   (CMO:0003717)    
LOD Score: Not Available
P Value: 4.0E-7
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38123,841,264 - 23,841,265RGD_MAPPER_PIPELINEGRCh38
GRCh37124,167,754 - 24,167,755RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1308461_HHumanpulse wave velocity  IAGPrs149320025405850206 GWAS_CATALOGPMID:31235810

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1308461_HHumanarterial stiffness measurement  IAGPrs149320025405850206 GWAS_CATALOGPMID:31235810

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs149320025)
Human AssemblyChrPosition (strand)Source
GRCh38123,841,264 - 23,841,265RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
597212387GWAS1308461_Harterial stiffness measurement QTL GWAS1308461 (human)0.0000004arterial stiffness measurementpulse wave velocity (CMO:0003717)12384126423841265Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1308461_H GCST008403 Arterial stiffness index 127,121 European ancestry individuals G 0.466 4E-7 6.398 rs149320025 0.088 arterial stiffness measurement (EFO:0004517)
 PMID:31235810
Database
Acc Id
Source(s)
GWAS Catalog GCST008403 GWAS Catalog

Note Type Note Reference