GWAS1292487_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1292487_H (memory performance QTL GWAS1292487 (human)) Homo sapiens

Symbol: GWAS1292487_H
Name: memory performance QTL GWAS1292487 (human)
RGD ID: 597196413
Trait: memory performance
LOD Score: Not Available
P Value: 6.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381554,423,152 - 54,423,153RGD_MAPPER_PIPELINEGRCh38
GRCh371554,715,350 - 54,715,351RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1292487_HHumanmemory performance  IAGPrs8025599405850206 GWAS_CATALOGPMID:37984853

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1354378UNC13Cunc-13 homolog C155383760254633440Human


Peak: (rs8025599)
Human AssemblyChrPosition (strand)Source
GRCh381554,423,152 - 54,423,153RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
596980390GWAS1099909_Hmemory performance QTL GWAS1099909 (human)0.000006memory performance155442315254423153Human
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
597196413GWAS1292487_Hmemory performance QTL GWAS1292487 (human)0.000006memory performance155442315254423153Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1292487_H GCST90448422 Baseline memory in impaired cognition 373 African ancestry males ? NR 0.000006 5.222 rs8025599 0.253389 memory performance (EFO:0004874)
 PMID:37984853
Database
Acc Id
Source(s)
GWAS Catalog GCST90448422 GWAS Catalog

Note Type Note Reference