GWAS1291047_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1291047_H (free androgen index QTL GWAS1291047 (human)) Homo sapiens

Symbol: GWAS1291047_H
Name: free androgen index QTL GWAS1291047 (human)
RGD ID: 597194973
Trait: free androgen index
LOD Score: Not Available
P Value: 6.0E-9
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38121,773,443 - 21,773,444RGD_MAPPER_PIPELINEGRCh38
GRCh37122,099,936 - 22,099,937RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1291047_HHumanfree androgen index  IAGPrs6694903405850206 GWAS_CATALOGPMID:36653534

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1351270USP48ubiquitin specific peptidase 4812167829821783149Human


Peak: (rs6694903)
Human AssemblyChrPosition (strand)Source
GRCh38121,773,443 - 21,773,444RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
597194973GWAS1291047_Hfree androgen index QTL GWAS1291047 (human)6e-09free androgen index12177344321773444Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1291047_H GCST90239824 Free androgen index 158,208 British ancestry women ? NR 6E-9 8.222 rs6694903 0.0243849 free androgen index (EFO:0007005)
 PMID:36653534
Database
Acc Id
Source(s)
GWAS Catalog GCST90239824 GWAS Catalog

Note Type Note Reference