GWAS1281723_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1281723_H (migraine disorder, Headache QTL GWAS1281723 (human)) Homo sapiens

Symbol: GWAS1281723_H
Name: migraine disorder, Headache QTL GWAS1281723 (human)
RGD ID: 597185649
Trait: migraine disorder, Headache
LOD Score: Not Available
P Value: 1.0E-12
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3813,176,738 - 3,176,739RGD_MAPPER_PIPELINEGRCh38
GRCh3713,093,302 - 3,093,303RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1281723_HHumanmigraine  IAGPrs12038657405850206Based on the MONDO term ID from GWASGWAS_CATALOGPMID:36939796

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1281723_HHumanHeadache  IAGPrs12038657405850206 GWAS_CATALOGPMID:36939796

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1353101PRDM16PR/SET domain 16130692033438621Human


Peak: (rs12038657)
Human AssemblyChrPosition (strand)Source
GRCh3813,176,738 - 3,176,739RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
597185649GWAS1281723_Hmigraine disorder, Headache QTL GWAS1281723 (human)1e-12migraine disorder, Headache131767383176739Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1281723_H GCST90267554 Headache or migraine 397,385 European ancestry individuals ? NR 1E-12 12 rs12038657 N/A Headache (HP:0002315)
 PMID:36939796
Database
Acc Id
Source(s)
GWAS Catalog GCST90267554 GWAS Catalog

Note Type Note Reference