GWAS1273918_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1273918_H (protein measurement QTL GWAS1273918 (human)) Homo sapiens

Symbol: GWAS1273918_H
Name: protein measurement QTL GWAS1273918 (human)
RGD ID: 597177844
Trait: protein measurement
LOD Score: Not Available
P Value: 2.0E-20
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38111,044,788 - 11,044,789RGD_MAPPER_PIPELINEGRCh38
GRCh37111,104,845 - 11,104,846RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1273918_HHumanprotein measurement  IAGPrs9430347405850206 GWAS_CATALOGPMID:34648354

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1606320MASP2MBL associated serine protease 211102652311047239Human


Peak: (rs9430347)
Human AssemblyChrPosition (strand)Source
GRCh38111,044,788 - 11,044,789RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
597177844GWAS1273918_Hprotein measurement QTL GWAS1273918 (human)2e-20protein measurement11104478811044789Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1273918_H GCST90248152 Kidney-associated antigen 1 levels 10,708 European ancestry individuals T 0.2 2E-20 19.699 rs9430347 0.154 protein measurement (EFO:0004747)
 PMID:34648354
Database
Acc Id
Source(s)
GWAS Catalog GCST90248152 GWAS Catalog

Note Type Note Reference