GWAS1267862_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1267862_H (protein measurement QTL GWAS1267862 (human)) Homo sapiens

Symbol: GWAS1267862_H
Name: protein measurement QTL GWAS1267862 (human)
RGD ID: 597171788
Trait: protein measurement
LOD Score: Not Available
P Value: 8.0E-17
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38424,799,693 - 24,799,694RGD_MAPPER_PIPELINEGRCh38
GRCh37424,801,315 - 24,801,316RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1267862_HHumanprotein measurement  IAGPrs2536512405850206 GWAS_CATALOGPMID:34648354

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
736515SOD3superoxide dismutase 342479557324800842Human


Peak: (rs2536512)
Human AssemblyChrPosition (strand)Source
GRCh38424,799,693 - 24,799,694RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597171788GWAS1267862_Hprotein measurement QTL GWAS1267862 (human)8e-17protein measurement42479969324799694Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1267862_H GCST90247197 Extracellular superoxide dismutase [Cu-Zn] levels 10,708 European ancestry individuals A 0.65 8E-17 16.097 rs2536512 0.119 protein measurement (EFO:0004747)
 PMID:34648354
Database
Acc Id
Source(s)
GWAS Catalog GCST90247197 GWAS Catalog

Note Type Note Reference