GWAS1260357_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1260357_H (glaucoma QTL GWAS1260357 (human)) Homo sapiens

Symbol: GWAS1260357_H
Name: glaucoma QTL GWAS1260357 (human)
RGD ID: 597164283
Trait: glaucoma
LOD Score: Not Available
P Value: 1.0E-10
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38111,451,115 - 11,451,116RGD_MAPPER_PIPELINEGRCh38
GRCh37111,511,172 - 11,511,173RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1260357_HHumanglaucoma  IAGPrs149002763405850206Based on the MONDO term ID from GWASGWAS_CATALOGPMID:34594039


#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs149002763)
Human AssemblyChrPosition (strand)Source
GRCh38111,451,115 - 11,451,116RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
597164283GWAS1260357_Hglaucoma QTL GWAS1260357 (human)1e-10glaucoma11145111511451116Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1260357_H GCST90018852 Glaucoma 10,411 European ancestry cases, 474,568 European ancestry controls, 8,448 East Asian ancestry cases, 168,903 East Asian ancestry controls T NR 1E-10 10 rs149002763 0.3319 PMID:34594039
Database
Acc Id
Source(s)
GWAS Catalog GCST90018852 GWAS Catalog

Note Type Note Reference