GWAS1244067_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1244067_H (COVID-19 QTL GWAS1244067 (human)) Homo sapiens

Symbol: GWAS1244067_H
Name: COVID-19 QTL GWAS1244067 (human)
RGD ID: 597147993
Trait: COVID-19
LOD Score: Not Available
P Value: 7.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh382140,169,802 - 40,169,803RGD_MAPPER_PIPELINEGRCh38
GRCh372141,541,729 - 41,541,730RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1244067_HHumanCOVID-19  IAGPrs1888500405850206Based on the MONDO term ID from GWASGWAS_CATALOGPMID:36662838


#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
732493DSCAMDS cell adhesion molecule214001099940847158Human


Peak: (rs1888500)
Human AssemblyChrPosition (strand)Source
GRCh382140,169,802 - 40,169,803RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2303081MAMTS49_HMammary tumor susceptibility QTL 49 (human)1.72Mammary tumor susceptibility211795044843950448Human
597147993GWAS1244067_HCOVID-19 QTL GWAS1244067 (human)7e-08COVID-19214016980240169803Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1244067_H GCST90255358 Resistance to COVID-19 infection (Exposed negative vs positive) 306 resistant cases, up to 770 benign, mild or severe controls ? NR 7E-8 7.155 rs1888500 N/A PMID:36662838
Database
Acc Id
Source(s)
GWAS Catalog GCST90255358 GWAS Catalog

Note Type Note Reference