GWAS1229946_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1229946_H (waist-hip ratio QTL GWAS1229946 (human)) Homo sapiens

Symbol: GWAS1229946_H
Name: waist-hip ratio QTL GWAS1229946 (human)
RGD ID: 597133872
Trait: waist-hip ratio
Measurement Type: waist to hip ratio (WHR)   (CMO:0000020)    
LOD Score: Not Available
P Value: 1.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh382046,930,098 - 46,930,099RGD_MAPPER_PIPELINEGRCh38
GRCh372045,558,737 - 45,558,738RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1229946_HHumanwaist to hip ratio (WHR)  IAGPrs6066123405850206 GWAS_CATALOGPMID:38116116

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1229946_HHumanwaist-hip ratio  IAGPrs6066123405850206 GWAS_CATALOGPMID:38116116

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1350703EYA2EYA transcriptional coactivator and phosphatase 2204689484347188844Human


Peak: (rs6066123)
Human AssemblyChrPosition (strand)Source
GRCh382046,930,098 - 46,930,099RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300007BP29_HBlood pressure QTL 29 (human)Blood pressurehypertension susceptibility203653600562536005Human
597133872GWAS1229946_Hwaist-hip ratio QTL GWAS1229946 (human)1e-08waist-hip ratiowaist to hip ratio (WHR) (CMO:0000020)204693009846930099Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1229946_H GCST90278649 Waist-hip ratio 92,615 Taiwanese ancestry individuals ? NR 1E-8 8 rs6066123 N/A waist-hip ratio (EFO:0004343)
 PMID:38116116
Database
Acc Id
Source(s)
GWAS Catalog GCST90278649 GWAS Catalog

Note Type Note Reference