GWAS1229569_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1229569_H (pulse pressure measurement QTL GWAS1229569 (human)) Homo sapiens

Symbol: GWAS1229569_H
Name: pulse pressure measurement QTL GWAS1229569 (human)
RGD ID: 597133495
Trait: pulse pressure measurement
Measurement Type: pulse pressure   (CMO:0000292)    
LOD Score: Not Available
P Value: 1.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3811,631,710 - 1,631,711RGD_MAPPER_PIPELINEGRCh38
GRCh3711,567,089 - 1,567,090RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1229569_HHumanpulse pressure  IAGPrs28451771405850206 GWAS_CATALOGPMID:38689001

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1229569_HHumanpulse pressure measurement  IAGPrs28451771405850206 GWAS_CATALOGPMID:38689001

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
151668143LOC124903821uncharacterized LOC124903821116247571631786Human


Peak: (rs28451771)
Human AssemblyChrPosition (strand)Source
GRCh3811,631,710 - 1,631,711RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
597133495GWAS1229569_Hpulse pressure measurement QTL GWAS1229569 (human)1e-08pulse pressure measurementpulse pressure (CMO:0000292)116317101631711Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1229569_H GCST90310296 Pulse pressure 1,028,980 European ancestry individuals C NR 1E-8 8 rs28451771 0.2036 pulse pressure measurement (EFO:0005763)
 PMID:38689001
Database
Acc Id
Source(s)
GWAS Catalog GCST90310296 GWAS Catalog

Note Type Note Reference