GWAS1221827_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1221827_H (appendicular lean mass QTL GWAS1221827 (human)) Homo sapiens

Symbol: GWAS1221827_H
Name: appendicular lean mass QTL GWAS1221827 (human)
RGD ID: 597125753
Trait: appendicular lean mass
LOD Score: Not Available
P Value: 8.0E-11
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh389133,524,893 - 133,524,894RGD_MAPPER_PIPELINEGRCh38
GRCh379136,390,015 - 136,390,016RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1221827_HHumanappendicular lean mass  IAGPrs13300181405850206 GWAS_CATALOGPMID:33097823

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
3302829MYMKmyomaker, myoblast fusion factor9133514586133524959Human


Peak: (rs13300181)
Human AssemblyChrPosition (strand)Source
GRCh389133,524,893 - 133,524,894RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597125753GWAS1221827_Happendicular lean mass QTL GWAS1221827 (human)8e-11appendicular lean mass9133524893133524894Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1221827_H GCST90000025 Appendicular lean mass 450,243 European ancestry individuals A 0.6455 8E-11 10.097 rs13300181 0.0122 appendicular lean mass (EFO:0004980)
 PMID:33097823
Database
Acc Id
Source(s)
GWAS Catalog GCST90000025 GWAS Catalog

Note Type Note Reference