GWAS1218433_H QTL Report (Homo sapiens) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
QTL Registration

QTL: GWAS1218433_H (electrocardiography QTL GWAS1218433 (human)) Homo sapiens

Symbol: GWAS1218433_H
Name: electrocardiography QTL GWAS1218433 (human)
RGD ID: 597122359
Trait: electrocardiography
LOD Score: Not Available
P Value: 1.0E-10
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3863,287,747 - 3,287,748RGD_MAPPER_PIPELINEGRCh38
GRCh3763,287,981 - 3,287,982RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1218433_HHumanelectrocardiography  IAGPrs61367953405850206 GWAS_CATALOGPMID:32916098

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1347503SLC22A23solute carrier family 22 member 23632689733457050Human


Peak: (rs61367953)
Human AssemblyChrPosition (strand)Source
GRCh3863,287,747 - 3,287,748RGD_MAPPER_PIPELINE


1 to 10 of 26 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1643418BW282_HBody Weight QTL 282 (human)2.070.001Body weight6119321359Human
597122515GWAS1218589_Helectrocardiography QTL GWAS1218589 (human)4e-09electrocardiography632877473287748Human
2289320BW390_HBody weight QTL 390 (human)2.13Body weightBMI6119321359Human
597125445GWAS1221519_Helectrocardiography QTL GWAS1221519 (human)2e-09electrocardiography632877473287748Human
597261253GWAS1357327_Helectrocardiography QTL GWAS1357327 (human)7e-13electrocardiography632877473287748Human
597261255GWAS1357329_Helectrocardiography QTL GWAS1357329 (human)7e-10electrocardiography632877473287748Human
597261254GWAS1357328_Helectrocardiography QTL GWAS1357328 (human)7e-11electrocardiography632877473287748Human
597122359GWAS1218433_Helectrocardiography QTL GWAS1218433 (human)1e-10electrocardiography632877473287748Human
597122358GWAS1218432_Helectrocardiography QTL GWAS1218432 (human)9e-12electrocardiography632877473287748Human
2289408BW324_HBody weight QTL 324 (human)3.150.0001Body fat amount6120803913Human

1 to 10 of 26 rows


1 to 20 of 33 rows
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1218433_H GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 1E-10 10 rs61367953 0.0690176 electrocardiography (EFO:0004327)
 PMID:32916098
GWAS1217654_H GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 5E-9 8.302 rs61367953 0.0643704 electrocardiography (EFO:0004327)
 PMID:32916098
GWAS1217655_H GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 1E-8 8 rs61367953 0.063406 electrocardiography (EFO:0004327)
 PMID:32916098
GWAS1217656_H GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 6E-10 9.222 rs61367953 0.0671264 electrocardiography (EFO:0004327)
 PMID:32916098
GWAS1217657_H GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 5E-10 9.302 rs61367953 0.0675031 electrocardiography (EFO:0004327)
 PMID:32916098
GWAS1218429_H GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 1E-9 9 rs61367953 0.0660855 electrocardiography (EFO:0004327)
 PMID:32916098
GWAS1218430_H GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 2E-8 7.699 rs61367953 0.0612496 electrocardiography (EFO:0004327)
 PMID:32916098
GWAS1218431_H GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 3E-10 9.523 rs61367953 0.0687352 electrocardiography (EFO:0004327)
 PMID:32916098
GWAS1218432_H GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 9E-12 11.046 rs61367953 0.0727283 electrocardiography (EFO:0004327)
 PMID:32916098
GWAS1218434_H GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 3E-12 11.523 rs61367953 0.0749531 electrocardiography (EFO:0004327)
 PMID:32916098
GWAS1218435_H GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 4E-12 11.398 rs61367953 0.0758088 electrocardiography (EFO:0004327)
 PMID:32916098
None Available GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 1E-10 10 rs61367953 0.0677284 electrocardiography (EFO:0004327)
 PMID:32916098
None Available GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 3E-10 9.523 rs61367953 0.0662138 electrocardiography (EFO:0004327)
 PMID:32916098
GWAS1218436_H GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 4E-11 10.398 rs61367953 0.0698971 electrocardiography (EFO:0004327)
 PMID:32916098
None Available GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 3E-10 9.523 rs61367953 0.0660853 electrocardiography (EFO:0004327)
 PMID:32916098
None Available GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 1E-8 8 rs61367953 0.0603223 electrocardiography (EFO:0004327)
 PMID:32916098
GWAS1218437_H GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 6E-9 8.222 rs61367953 0.0625292 electrocardiography (EFO:0004327)
 PMID:32916098
None Available GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 3E-10 9.523 rs61367953 0.0690086 electrocardiography (EFO:0004327)
 PMID:32916098
GWAS1218438_H GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 2E-11 10.699 rs61367953 0.0705194 electrocardiography (EFO:0004327)
 PMID:32916098
None Available GCST010796 Electrocardiogram morphology (amplitude at temporal datapoints) 63,706 European and unknown ancestry individuals G 0.933125 2E-11 10.699 rs61367953 0.0699696 electrocardiography (EFO:0004327)
 PMID:32916098
1 to 20 of 33 rows
Database
Acc Id
Source(s)
GWAS Catalog GCST010796 GWAS Catalog

Note Type Note Reference