GWAS1199451_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1199451_H (myocardial infarction QTL GWAS1199451 (human)) Homo sapiens

Symbol: GWAS1199451_H
Name: myocardial infarction QTL GWAS1199451 (human)
RGD ID: 597103377
Trait: myocardial infarction
LOD Score: Not Available
P Value: 1.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3813,000,908 - 3,000,909RGD_MAPPER_PIPELINEGRCh38
GRCh3712,917,472 - 2,917,473RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1199451_HHumanmyocardial infarction  IAGPrs10797376405850206 GWAS_CATALOGPMID:33532862

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1199451_HHumanMyocardial infarction  IAGPrs10797376405850206 GWAS_CATALOGPMID:33532862
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1199451_HHumanmyocardial infarction  IAGPrs10797376405850206 GWAS_CATALOGPMID:33532862

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs10797376)
Human AssemblyChrPosition (strand)Source
GRCh3813,000,908 - 3,000,909RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
597103377GWAS1199451_Hmyocardial infarction QTL GWAS1199451 (human)0.000001myocardial infarction130009083000909Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1199451_H GCST011365 Myocardial infarction 14,825 European ancestry cases, 44,000 European and unknown ancestry cases, 2,680 cases, 380,970 European ancestry controls, 123,504 European and unknown ancestry controls, 73,242 controls A 0.874726 0.000001 6 rs10797376 1.06 myocardial infarction (EFO:0000612)
 PMID:33532862
Database
Acc Id
Source(s)
GWAS Catalog GCST011365 GWAS Catalog

Note Type Note Reference