GWAS1156090_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1156090_H (vital capacity QTL GWAS1156090 (human)) Homo sapiens

Symbol: GWAS1156090_H
Name: vital capacity QTL GWAS1156090 (human)
RGD ID: 597060016
Trait: vital capacity
LOD Score: Not Available
P Value: 2.0E-12
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3819,381,418 - 9,381,419RGD_MAPPER_PIPELINEGRCh38
GRCh3719,441,477 - 9,441,478RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1156090_HHumanvital capacity  IAGPrs1890683405850206 GWAS_CATALOGPMID:30595370

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs1890683)
Human AssemblyChrPosition (strand)Source
GRCh3819,381,418 - 9,381,419RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
597060016GWAS1156090_Hvital capacity QTL GWAS1156090 (human)2e-12vital capacity193814189381419Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1156090_H GCST007081 Lung function (FVC) approximately 372,000 European ancestry individuals ? NR 2E-12 11.699 rs1890683 N/A vital capacity (EFO:0004312)
 PMID:30595370
Database
Acc Id
Source(s)
GWAS Catalog GCST007081 GWAS Catalog

Note Type Note Reference