GWAS1152761_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1152761_H (allergic rhinitis QTL GWAS1152761 (human)) Homo sapiens

Symbol: GWAS1152761_H
Name: allergic rhinitis QTL GWAS1152761 (human)
RGD ID: 597056687
Trait: allergic rhinitis
LOD Score: Not Available
P Value: 5.0E-11
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh382047,053,702 - 47,053,703RGD_MAPPER_PIPELINEGRCh38
GRCh372045,682,341 - 45,682,342RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1152761_HHumanallergic rhinitis  IAGPrs6094570405850206 GWAS_CATALOGPMID:31361310

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1152761_HHumanAllergic rhinitis  IAGPrs6094570405850206 GWAS_CATALOGPMID:31361310
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1152761_HHumanallergic rhinitis  IAGPrs6094570405850206 GWAS_CATALOGPMID:31361310

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1350703EYA2EYA transcriptional coactivator and phosphatase 2204689484347188844Human


Peak: (rs6094570)
Human AssemblyChrPosition (strand)Source
GRCh382047,053,702 - 47,053,703RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300007BP29_HBlood pressure QTL 29 (human)Blood pressurehypertension susceptibility203653600562536005Human
597056687GWAS1152761_Hallergic rhinitis QTL GWAS1152761 (human)5e-11allergic rhinitis204705370247053703Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1152761_H GCST009719 Allergic rhinitis 18,915 European ancestry cases, 239,773 European ancestry controls A 0.7412 5E-11 10.302 rs6094570 1.0893246 allergic rhinitis (EFO:0005854)
 PMID:31361310
GWAS1787355_H GCST90245848 Height 5,314,291 European ancestry, Hispanic or Latin American, East Asian ancestry, African ancestry, South Asian ancestry individuals G 0.2376 2E-8 7.699 rs6094570 0.0042 body height (OBA:VT0001253)
 PMID:36224396
Database
Acc Id
Source(s)
GWAS Catalog GCST009719 GWAS Catalog

Note Type Note Reference