GWAS1152658_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1152658_H (eosinophil count QTL GWAS1152658 (human)) Homo sapiens

Symbol: GWAS1152658_H
Name: eosinophil count QTL GWAS1152658 (human)
RGD ID: 597056584
Trait: eosinophil quantity   (VT:0002602)    
Measurement Type: blood eosinophil count   (CMO:0000033)    
LOD Score: Not Available
P Value: 1.0E-15
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38577,253,863 - 77,253,864RGD_MAPPER_PIPELINEGRCh38
GRCh37576,549,688 - 76,549,689RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1152658_HHumanblood eosinophil count  IAGPrs4703730405850206 GWAS_CATALOGPMID:32888494

Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1152658_HHumaneosinophil quantity  IAGPrs4703730405850206 GWAS_CATALOGPMID:32888494

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1152658_HHumaneosinophil count  IAGPrs4703730405850206 GWAS_CATALOGPMID:32888494

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1348334PDE8Bphosphodiesterase 8B57708671577428256Human


Peak: (rs4703730)
Human AssemblyChrPosition (strand)Source
GRCh38577,253,863 - 77,253,864RGD_MAPPER_PIPELINE


1 to 10 of 10 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
406962577GWAS611553_Heosinophil count QTL GWAS611553 (human)1e-15eosinophil count57725386377253864Human
596961333GWAS1080852_Heosinophil count QTL GWAS1080852 (human)1e-17eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)57725386377253864Human
596961911GWAS1081430_Heosinophil percentage of leukocytes QTL GWAS1081430 (human)1e-13eosinophil quantity (VT:0002602)blood eosinophil count to total leukocyte count ratio (CMO:0000369)57725386377253864Human
596962144GWAS1081663_Heosinophil count QTL GWAS1081663 (human)7e-16eosinophil count57725386377253864Human
596962145GWAS1081664_Heosinophil count QTL GWAS1081664 (human)1e-15eosinophil count57725386377253864Human
406981365GWAS630341_Heosinophil count QTL GWAS630341 (human)1e-17eosinophil count57725386377253864Human
597057053GWAS1153127_Heosinophil count QTL GWAS1153127 (human)7e-16eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)57725386377253864Human
406963308GWAS612284_Heosinophil percentage of leukocytes QTL GWAS612284 (human)1e-13eosinophil percentage of leukocytes57725386377253864Human
406962575GWAS611551_Heosinophil count QTL GWAS611551 (human)7e-16eosinophil count57725386377253864Human
597056584GWAS1152658_Heosinophil count QTL GWAS1152658 (human)1e-15eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)57725386377253864Human

1 to 10 of 10 rows


Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1152658_H GCST90002381 Eosinophil counts 408,112 British individuals T 0.516742 1E-15 15 rs4703730 0.017772496 eosinophil count (EFO:0004842)
 PMID:32888494
GWAS1153127_H GCST90002298 Eosinophil counts 474,237 European ancestry individuals T 0.516976 7E-16 15.155 rs4703730 0.016026 eosinophil count (EFO:0004842)
 PMID:32888493
GWAS1080852_H GCST007065 Eosinophil counts approximately 440,000 European ancestry individuals ? NR 1E-17 17 rs4703730 N/A eosinophil count (EFO:0004842)
 PMID:30595370
GWAS1081430_H GCST90002382 Eosinophil percentage of white cells 408,112 British individuals T 0.516732 1E-13 13 rs4703730 0.016381875 eosinophil percentage of leukocytes (EFO:0007991)
 PMID:32888494
Database
Acc Id
Source(s)
GWAS Catalog GCST90002381 GWAS Catalog

Note Type Note Reference