GWAS1152490_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1152490_H (FEV/FVC ratio QTL GWAS1152490 (human)) Homo sapiens

Symbol: GWAS1152490_H
Name: FEV/FVC ratio QTL GWAS1152490 (human)
RGD ID: 597056416
Trait: FEV/FVC ratio
Measurement Type: forced expiratory volume to forced vital capacity ratio   (CMO:0000241)    
LOD Score: Not Available
P Value: 1.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381611,149,598 - 11,149,599RGD_MAPPER_PIPELINEGRCh38
GRCh371611,243,455 - 11,243,456RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1152490_HHumanforced expiratory volume to forced vital capacity ratio  IAGPrs34720006405850206 GWAS_CATALOGPMID:30595370

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1152490_HHumanFEV/FVC ratio  IAGPrs34720006405850206 GWAS_CATALOGPMID:30595370

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1604037CLEC16AC-type lectin domain containing 16A161094456411182186Human


Peak: (rs34720006)
Human AssemblyChrPosition (strand)Source
GRCh381611,149,598 - 11,149,599RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597056416GWAS1152490_HFEV/FVC ratio QTL GWAS1152490 (human)1e-08FEV/FVC ratioforced expiratory volume to forced vital capacity ratio (CMO:0000241)161114959811149599Human
597162857GWAS1258931_HNasal Cavity Polyp QTL GWAS1258931 (human)2e-11Nasal Cavity Polyp161114959811149599Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1152490_H GCST007080 Lung function (FEV1/FVC) approximately 370,000 European ancestry individuals ? NR 1E-8 8 rs34720006 N/A FEV/FVC ratio (EFO:0004713)
 PMID:30595370
GWAS1258931_H GCST90018883 Nasal polyps 5,093 European ancestry cases, 444,966 European ancestry controls, 160 East Asian ancestry cases, 151,846 East Asian ancestry controls A NR 2E-11 10.699 rs34720006 0.1614 Nasal Cavity Polyp (EFO:1000391)
 PMID:34594039
Database
Acc Id
Source(s)
GWAS Catalog GCST007080 GWAS Catalog

Note Type Note Reference