GWAS1148839_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1148839_H (BMI-adjusted waist-hip ratio QTL GWAS1148839 (human)) Homo sapiens

Symbol: GWAS1148839_H
Name: BMI-adjusted waist-hip ratio QTL GWAS1148839 (human)
RGD ID: 597052765
Trait: body size trait   (VT:0100005)    
LOD Score: Not Available
P Value: 4.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3866,631,763 - 6,631,764RGD_MAPPER_PIPELINEGRCh38
GRCh3766,631,996 - 6,631,997RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1148839_HHumanbody size trait  IAGPrs11963955405850206 GWAS_CATALOGPMID:31669095

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1148839_HHumanBMI-adjusted waist-hip ratio  IAGPrs11963955405850206 GWAS_CATALOGPMID:31669095

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1320546LY86lymphocyte antigen 86665887206654982Human


Peak: (rs11963955)
Human AssemblyChrPosition (strand)Source
GRCh3866,631,763 - 6,631,764RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2289408BW324_HBody weight QTL 324 (human)3.150.0001Body fat amount6120803913Human
1643418BW282_HBody Weight QTL 282 (human)2.070.001Body weight6119321359Human
2289435BMD4_HBone mineral density QTL 4 (human)3.150.0001Bone mineral density6120803913Human
2292824PRSTS5_HProstate tumor susceptibility QTL 5 (human)Prostate tumor susceptibility6119232373Human
2289320BW390_HBody weight QTL 390 (human)2.13Body weightBMI6119321359Human
597052765GWAS1148839_HBMI-adjusted waist-hip ratio QTL GWAS1148839 (human)4e-08body size trait (VT:0100005)666317636631764Human
1643495BW291_HBody Weight QTL 291 (human)2.13Body weightBMI6119321359Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1148839_H GCST009858 Waist-to-hip ratio adjusted for BMI 457,690 European ancestry individuals ? NR 4E-8 7.398 rs11963955 N/A BMI-adjusted waist-hip ratio (EFO:0007788)
 PMID:31669095
Database
Acc Id
Source(s)
GWAS Catalog GCST009858 GWAS Catalog

Note Type Note Reference