GWAS1148740_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1148740_H (Red cell distribution width QTL GWAS1148740 (human)) Homo sapiens

Symbol: GWAS1148740_H
Name: Red cell distribution width QTL GWAS1148740 (human)
RGD ID: 597052666
Trait: Red cell distribution width
Measurement Type: red blood cell distribution width- standard deviation   (CMO:0003232)    
red blood cell distribution width-coefficient of variation   (CMO:0000041)    
LOD Score: Not Available
P Value: 4.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3866,924,907 - 6,924,908RGD_MAPPER_PIPELINEGRCh38
GRCh3766,925,140 - 6,925,141RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1148740_HHumanred blood cell distribution width- standard deviation  IAGPrs6911310405850206 GWAS_CATALOGPMID:30595370
GWAS1148740_HHumanred blood cell distribution width-coefficient of variation  IAGPrs6911310405850206 GWAS_CATALOGPMID:30595370

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1148740_HHumanRed cell distribution width  IAGPrs6911310405850206 GWAS_CATALOGPMID:30595370

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs6911310)
Human AssemblyChrPosition (strand)Source
GRCh3866,924,907 - 6,924,908RGD_MAPPER_PIPELINE


1 to 10 of 14 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2289408BW324_HBody weight QTL 324 (human)3.150.0001Body fat amount6120803913Human
1643418BW282_HBody Weight QTL 282 (human)2.070.001Body weight6119321359Human
596958547GWAS1078066_HRed cell distribution width QTL GWAS1078066 (human)4e-08Red cell distribution width669249076924908Human
1643377BW325_HBody weight QTL 325 (human)2.320.0005Body fat amount6691196032911960Human
1643569GLUCO21_HGlucose level QTL 21 (human)0.021Glucose levelnon-insulin-dependent6691196032911960Human
1298458BW9_HBody weight QTL 9 (human)2.70.0002Body fat amount6691196032911960Human
2289320BW390_HBody weight QTL 390 (human)2.13Body weightBMI6119321359Human
597052666GWAS1148740_HRed cell distribution width QTL GWAS1148740 (human)4e-08Red cell distribution widthred blood cell distribution width- standard deviation (CMO:0003232)669249076924908Human
1358854MULTSCL4_HMultiple sclerosis susceptibility QTL 4 (human)Multiple sclerosis susceptibility6691196032911960Human
407385150GWAS1034126_Hobsolete_red blood cell distribution width QTL GWAS1034126 (human)4e-08obsolete_red blood cell distribution width669249076924908Human

1 to 10 of 14 rows


Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1148740_H GCST007074 Red cell distribution width approximately 445,000 European ancestry individuals ? NR 4E-8 7.398 rs6911310 N/A Red cell distribution width (EFO:0009188)
 PMID:30595370
Database
Acc Id
Source(s)
GWAS Catalog GCST007074 GWAS Catalog

Note Type Note Reference