GWAS1145950_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1145950_H (atopic asthma QTL GWAS1145950 (human)) Homo sapiens

Symbol: GWAS1145950_H
Name: atopic asthma QTL GWAS1145950 (human)
RGD ID: 597049876
Trait: atopic asthma
LOD Score: Not Available
P Value: 4.0E-9
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381611,159,977 - 11,159,978RGD_MAPPER_PIPELINEGRCh38
GRCh371611,253,834 - 11,253,835RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1145950_HHumanallergic asthma  IAGPrs12925631405850206 GWAS_CATALOGPMID:31669095

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1145950_HHumanAsthma  IAGPrs12925631405850206 GWAS_CATALOGPMID:31669095
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1145950_HHumanatopic asthma  IAGPrs12925631405850206 GWAS_CATALOGPMID:31669095

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1604037CLEC16AC-type lectin domain containing 16A161094456411182186Human


Peak: (rs12925631)
Human AssemblyChrPosition (strand)Source
GRCh381611,159,977 - 11,159,978RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597049876GWAS1145950_Hatopic asthma QTL GWAS1145950 (human)4e-09atopic asthma161115997711159978Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1145950_H GCST009850 Atopic asthma 23,982 European ancestry cases, 393,169 European ancestry controls ? NR 4E-9 8.398 rs12925631 N/A atopic asthma (EFO:0010638)
 PMID:31669095
Database
Acc Id
Source(s)
GWAS Catalog GCST009850 GWAS Catalog

Note Type Note Reference